Publications:

    2012-...


    1. Vüllings A., Hizanidis J., Omelchenko I., Hövel P. Clustered Chimera States in Excitable Elements of Type I to appear in New J. Phys. (2014).
    2. Bountis T., Kanas V. G., Hizanidis J., Bezerianos A. Chimera states in a Two-Population Network of Coupled Pendulum-Like Elements (2014) Eur. Phys. J. Special Topics 223: 721.
    3. Hizanidis J., Kanas V. G., Bezerianos A., Bountis T. Chimera states in networks of Hindmarsh-Rose oscillators (2014) Int. J. Bif. Chaos 24: 1450030.
    4. Hizanidis J., Katsaloulis P.,Verganelakis D. A., Provata A. Describing the neuron axons network of the human brain by continuous flow models to appear in a special volume honoring the memory of John S. Nicolis, World Scientific (2014).
    5. Shabunin A, Provata A. Lattice limit cycle dynamics: Influence of long - distance reactive and diffusice mixing (2013) EUROPEAN PHYSICAL JOURNAL - Special Topics 222 (10): pages 2547-2557.
    6. Bagci G. B., Oikonomou T. Tsallis power laws and finite baths with negative heat capacity (2013) PHYSICAL REVIEW E 88 (4): Art. No 042126.
    7. Panagakou E, Boulougouris G. C., Provata A. Effective mean field approach to kinetic Monte Carlo simulations in limit cycle dynamics with reactive and diffusive rewiring (2013) EUROPEAN PHYSICAL JOURNAL B 86 (6): Art. No. 277.
    8. Almirantis Y., Provata A, Papageorgiou S. Evolutionary cinstraints favor a biophysical model explaining Hox Gene collinearity (2013) Current Genomics 14 (4): pages 279-288.
    9. Oikonomou T, Bagci G. B. Clausius versus Sackur - Tetrode entropies (2013) STUDIES IN HISTORY AND PHILOSOPHY OF MODERN PHYSICS 44 (2): pages 63-68.
    10. Katsaloulis P, Hizanidis J, Verganelakis D.A, Provata A. Complexity measures and noise effects on diffusion magnetic resonance imaging of the neuron axons network in the human brain (2012) Fluct. Noise Lett. 11 (4): Art. No. 1250032.
    11. Provata A, Beck C. Coupled intermittent maps modeling the statistics of genomic sequences: A network approach (2012) PHYSICAL REVIEW E 86 (4): Art. No. 046101 Part 2.
    12. Katsaloulis P, Ghosh A, Philippe AC, et al. Fractality in the neuron axonal topography of the human brain based on 3-D diffusion MRI (2012) EUROPEAN PHYSICAL JOURNAL B 85 (5): Art. No. 150.
    13. Provata A, Katsaloulis P, Verganelakis DA. Dynamics of chaotic maps for modelling the multifractal spectrum of human brain Diffusion Tensor Images (2012) CHAOS SOLITONS & FRACTALS 45 (2): pages 174-180.
    14. Oikonomou T, Bagci G. B, Tirnakli U. Canonical equilibrium distribution derived from Helmholtz potential (2012) Physica A-Statistical Mechanics and its Applications 391 (24): 6386-6389.

    2006-2011


    1. Beck C, Provata A. Multifractal information production of the human genome (2011) EPL 95 (5): Art. No. 58002.
    2. Provata A, Beck C. Multifractal analysis of nonhyperbolic coupled map lattices: Application to genomic sequences (2011) Physical Review E 83 (6): Art. No. 066210 Part 2.
    3. Oikonomou T. Comment on "Critique of multinomial coefficient method for evaluating Tsallis and Renyi entropies" by AS Parvan (2011) Physica A-Statistical Mechanics and its Applications 390 (5): 781-784.
    4. Kouvaris N, Kugiumtzis D, Provata A. Species mobility induces synchronization in chaotic population (2011) Phys. Rev. E 84, 036211.
    5. Oikonomou T, Bagci GB. A completeness criterion for Kaniadakis, Abe and two-parameter generalized statistical theories (2010) Reports on Mathematical Physics 66 (1): 137-146.
    6. Kouvaris N, Schimansky-Geier L, Schöll E. Control of coherence in excitable systems by the interplay of noise and time-delay (2010) Eur. Phys. J. Special Topics 191, 29-51.
    7. Provata A, Katsaloulis P. Hierarchical multifractal representation of symbolic sequences and application to human chromosomes (2010) Physical Review E 81 (2): Art. No. 026102 Part 2.
    8. Kouvaris N, Müller F, Schimansky-Geier L. Ensembles of excitable two-state units with delayed feedback (2010) Phys. Rev. E 82, 061124.
    9. Oikonomou T, Bagci GB. The maximization of Tsallis entropy with complete deformed functions and the problem of constraints (2010) Physics Letters A 374 (22): 2225-2229.
    10. Kouvaris N, Provata A, Kugiumtzis D. Detecting synchronization in coupled stochastic ecosystem networks (2010) Physics Letters A 374 (4): 507-515.
    11. Kouvaris N, Provata A. Synchronization, stickiness effects and intermittent oscillations in coupled nonlinear stochastic networks (2009) European Physical Journal B 70 (4): 535-541.
    12. Katsaloulis P, Verganelakis DA, Provata A. Fractal Dimension and lacunarity of tractography images of the human brain (2009) Fractals-Complex Geometry Patterns and Scaling in Nature and Society 17 (2): 181-189.
    13. Katsaloulis P, Theoharis T, Provata A. Long range clustering of oligonucleotides containing the CG signal (2009) Journal Of Theoretical Biology 258 (1): 18-26.
    14. Oikonomou T, Bagci GB. A note on the definition of deformed exponential and logarithm functions (2009) Journal of Mathematical Physics 50 (10): Art. No. 103301.
    15. Oikonomou T, Tirnakli U. Generalized entropic structures and non-generality of Jaynes' Formalism (2009) Chaos Solitons & Fractals 42 (5): 3027-3034.
    16. Kouvaris, N., Provata, A. Dissipative oscillations in spatially restricted ecosystems due to long range migration (2008) European Physical Journal B, pp. 1-10.
    17. Efimov, A., Shabunin, A., Provata, A. Synchronization of stochastic oscillations due to long-range diffusion (2008) Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 78 (5), art. no. 056201, .
    18. Provata, A., Sokolov, I.M., Spagnolo, B. Editorial: Ecological complex systems (2008) European Physical Journal B, 65 (3), pp. 307-314.
    19. Noussiou, V.K., Provata, A. Kinetic Monte Carlo simulations of the oscillatory CO oxidation at high pressures: The surface oxide model (2008) Chemical Physics, 348 (1-3), pp. 11-20.
    20. Oikonomou, Th., Provata, A., Tirnakli, U. Nonextensive statistical approach to non-coding human DNA (2008) Physica A: Statistical Mechanics and its Applications, 387 (11), pp. 2653-2659.
    21. Kouvaris, N., Provata, A. Coexistence State on Trimolecular Reactive System with Spatial Disorder. (2008) Nonlinear Phenomena in Complex Systems,11,2, 2008, pp. 259-264.
    22. Oikonomou, Th. Tsallis, Rényi and nonextensive Gaussian entropy derived from the respective multinomial coefficients (2007) Physica A: Statistical Mechanics and its Applications 386 (1), pp. 119-134
    23. Oikonomou, Th. Properties of the "non-extensive Gaussian" entropy (2007) Physica A: Statistical Mechanics and its Applications 381 (1-2), pp. 155-163
    24. Sellis, D., Provata, A., Almirantis, Y. Alu and LINE1 distributions in the human chromosomes: Evidence of global genomic organization expressed in the form of power laws (2007) Molecular Biology and Evolution, 24 (11), pp. 2385-2399.
    25. Provata, A. Non-extensive block entropy statistics of Cantor fractal sets (2007) Physica A: Statistical Mechanics and its Applications, 381 (1-2), pp. 148-154.
    26. Noussiou, V.K., Provata, A. Surface reconstruction in reactive dynamics: A kinetic Monte Carlo approach (2007) Surface Science, 601 (14), pp. 2941-2951.
    27. Provata, A., Oikonomou, Th. Power law exponents characterizing human DNA (2007) Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 75 (5), art. no. 056102, .
    28. Provata, A., Noussiou, V.K. Fractal pattern formation in the Ziff-Gulari-Barshad model (2007) Journal of Physics Condensed Matter, 19 (6), art. no. 065128, .
    29. Chichigina, O.A., Tsekouras, G.A., Provata, A. Entropy, free energy and phase transitions in the lattice Lotka-Volterra model (2006) Journal of Experimental and Theoretical Physics, 103 (4), pp. 623-631.
    30. Katsaloulis, P., Theoharis, T., Zheng, W.M., Hao, B.L., Bountis, A., Almirantis, Y., Provata, A. Long-range correlations of RNA polymerase II promoter sequences across organisms (2006) Physica A: Statistical Mechanics and its Applications, 366, pp. 308-322.
    31. Tsekouras, G.A., Provata, A. Fractal formations in the Lattice Limit Cycle model (2006) European Physical Journal B, 52 (1), pp. 107-111.
    32. Oikonomou, Th., Provata, A. Non-extensive trends in the size distribution of coding and non-coding DNA sequences in the human genome (2006) European Physical Journal B, 50 (1-2), pp. 259-264.

    2001-2005


    1. Almirantis, Y., Provata, A. An evolutionary model for the origin of non-randomness, long-range order and fractality in the genome (2001) BioEssays, 23 (7), pp. 647-656.
    2. Rabias, I., Langlois, C., Provata, A., Howlin, B.J., Theodorou, D.N. Linking the atomistic scale and the mesoscale: Molecular orbital and solid state packing calculations on poly(p-phenylene) (2001) Polymer, 43 (1), pp. 185-193.
    3. Tsekouras, G.A., Provata, A. Fractal properties of the lattice Lotka-Volterra model (2002) Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 65 (1), art. no. 016204, pp. 016204/1-016204/8.
    4. Ilias, I., Vgontzas, A.N., Provata, A., Mastorakos, G. Complexity and non-linear description of diurnal cortisol and growth hormone secretory patterns before and after sleep deprivation. (2002) Endocrine regulations, 36 (2), pp. 63-72.
    5. Shabunin, A.V., Baras, F., Provata, A. Oscillatory reactive dynamics on surfaces: A lattice limit cycle model (2002) Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 66 (3), art. no. 036219, pp. 036219/1-036219/11.
    6. Provata, A., Almirantis, Y. Statistical dynamics of clustering in the genome structure (2002) Journal of Statistical Physics, 106 (1-2), pp. 23-56.
    7. Katsaloulis, P., Theoharis, T., Provata, A. Statistical distributions of oligonucleotide combinations: Applications in human chromosomes 21 and 22 (2002) Physica A: Statistical Mechanics and its Applications, 316 (1-4), pp. 380-396.
    8. Shabunin, A., Astakhov, V., Demidov, V., Provata, A., Baras, F., Nicolis, G., Anishchenko, V. Modeling chemical reactions by forced limit-cycle oscillator: Synchronization phenomena and transition to chaos (2003) Chaos, Solitons and Fractals, 15 (2), pp. 395-405.
    9. Abad, E., Provata, A., Nicolis, G. Reactive dynamics on fractal sets: Anomalous fluctuations and memory effects (2003) Europhysics Letters, 61 (5), pp. 586-592.
    10. Provata, A., Tsekouras, G.A. Spontaneous formation of dynamical patterns with fractal fronts in the cyclic lattice Lotka-Volterra model (2003) Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 67 (5 2), art. no. 056602, pp. 056602/1-056602/8.
    11. Sfyrakis, K., Provata, A., Povey, D.C., Howlin, B.J. Full-strand Minimization of Single and Double Stranded B-DNA Using Monte-Carlo Annealing (2003) Molecular Simulation, 29 (9), pp. 555-575.
    12. Tsekouras, G.A., Provata, A., Tsallis, C. Nonextensivity of the cyclic lattice Lotka-Volterra model (2004) Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 69 (1 2), art. no. 016120, pp. 161201-161207.
    13. De Decker, Y., Tsekouras, G.A., Provata, A., Emeux, Th., Nicolis, G. Propagating waves in one-dimensional discrete networks of coupled units (2004) Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 69 (3 2), art. no. 036203, pp. 036203-1-036203-8.
    14. Sfyrakis, K., Provata, A., Povey, D.C., Howlin, B.J. Local sequential minimization of double stranded B-DNA using Monte Carlo annealing (2004) Journal of Molecular Modeling, 10 (3), pp. 185-197.
    15. Kugiumtzis, D., Provata, A. Statistical analysis of gene and intergenic DNA sequences (2004) Physica A: Statistical Mechanics and its Applications, 342 (3-4), pp. 623-638.
    16. Shabunin, A.V., Efimov, A., Tsekouras, G.A., Provata, A. Scaling, cluster dynamics and complex oscillations in a multispecies Lattice Lotka-Volterra Model (2005) Physica A: Statistical Mechanics and its Applications, 347, pp. 117-136.
    17. Provata, A., Noussiou, V.K. Spatiotemporal oscillations and clustering in the Ziff-Gulari-Barshad model with surface reconstruction (2005) Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 72 (6), art. no. 066108, pp. 1-6.
    18. Katsaloulis, P., Theoharis, T., Provata, A. Statistical algorithms for long DNA sequences: Oligonucleotide distributions and homogeneity maps (2005) Scientific Programming, 13 (3), pp. 177-188.

    1990-2000


    1. Takayasu, H., Provata, A., Takayasu, M. Stability and relaxation of power-law distribution (1990) Physical Review A, 42 (12), pp. 7087-7090.
    2. Bouchaud, J.-P., Georges, A., Koplik, J., Provata, A., Redner, S. Superdiffusion in random velocity fields (1990) Physical Review Letters, 64 (21), pp. 2503-2506.
    3. Takayasu, H., Takayasu, M., Provata, A., Huber, G. Statistical properties of aggregation with injection (1991) Journal of Statistical Physics, 65 (3-4), pp. 725-745.
    4. Park, H., Provata, A., Redner, S. Interface growth with competing surface currents (1991) Journal of Physics A: Mathematical and General, 24 (24), art. no. 002, pp. L1391-L1397.
    5. Provata, A., Takayasu, M., Takayasu, H. Aggregation with power-law and fractal input (1992) Physica A: Statistical Mechanics and its Applications, 189 (1-2), pp. 4-14.
    6. Provata, A., Turner, J.W., Nicolis, G. Nonlinear chemical dynamics in low dimensions: An exactly soluble model (1993) Journal of Statistical Physics, 70 (5-6), pp. 1195-1213.
    7. Provata, A., Nicolis, C. A microscopic aggregation model of droplet dynamics in warm clouds (1994) Journal of Statistical Physics, 74 (1-2), pp. 75-89.
    8. Tribet, C., Provata, A., Nicolis, G. Lattice model for polymer propagation in confined media (1994) The Journal of Chemical Physics, 100 (8), pp. 6082-6087.
    9. Gaspard, P., Nicolis, G., Provata, A., Tasaki, S. Spectral signature of the pitchfork bifurcation: Liouville equation approach (1995) Physical Review E, 51 (1), pp. 74-94.
    10. Provata, A., Takayasu, H., Takayasu, M. Long-term memory effects in closed random aggregating systems (1996) Europhysics Letters, 33 (2), pp. 99-104.
    11. Tretyakov, A.Yu., Provata, A. Percolative treatment of the restricted trimolecular reaction A + 2X ⇋ 3X (1996) Fractals, 4 (2), pp. 193-198.
    12. Almirantis, Y., Provata, A. The 'clustered structure' of the purines/pyrimidines distribution in DNA distinguishes systematically between coding and non-coding sequences (1997) Bulletin of Mathematical Biology, 59 (5), pp. 975-992.
    13. Provata, A., Prassas, V.D., Theodorou, D.N. Surface tension and phase coexistence properties of the lattice fluid from a virtual site removal Monte Carlo strategy (1997) Journal of Chemical Physics, 107 (13), pp. 5125-5140.
    14. Provata, A., Almirantis, Y. Scaling properties of coding and non-coding DNA sequences (1997) Physica A: Statistical Mechanics and its Applications, 247 (1-4), pp. 482-496.
    15. Tretyakov, A.Yu., Provata, A. Steady State Behavior of Trimolecular Reaction a + 2X ⇌ 3X on a Square Lattice (1998) Journal of the Physical Society of Japan, 67 (2), pp. 430-433.
    16. Provata, A., Trohidou, K.N. Spatial distribution and fractal properties of aggregating magnetic and non-magnetic particles (1998) Fractals, 6 (3), pp. 219-230.
    17. Provata, A., Falaras, P., Xagas, A. Fractal features of titanium oxide surfaces (1998) Chemical Physics Letters, 297 (5-6), pp. 484-490.
    18. Provata, A. Random aggregation models for the formation and evolution of coding and non-coding DNA (1999) Physica A: Statistical Mechanics and its Applications, 264 (3-4), pp. 570-580.
    19. Provata, A.; Nicolis, G.; Baras, F. Oscillatory dynamics in low-dimensional supports: A lattice Lotka-Volterra model (1999) Journal of Chemical Physics, 110 (17), pp. 8361-8368.
    20. Almirantis, Y., Provata, A. Long-and short-range correlations in Genome organization (1999) Journal of Statistical Physics, 97 (1-2), pp. 233-262.
    21. Provata, A., Almirantis, Y. Fractal cantor patterns in the sequence structure of DNA (2000) Fractals, 8 (1), pp. 15-27.
    22. Rabias, I., Howlin, B.J., Provata, A., Theodorou, D. Modelling of structural and vibrational properties of poly(p-phenylene) and polypyrrole using molecular orbital methods (2000) Molecular Simulation, 24 (1-3), pp. 95-109.